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* Documents [#a496e151]

** Documents about KAPSEL [#fba3e606]

- Books

-- "[[Computer Simulation of Polymeric Materials:http://www.springer.com/jp/book/9789811008146]]" Chapter 8: KAPSEL: Colloidal Dispersion Simulator (Springer, 2016)

-- 「高分子材料シミュレーション -OCTA活用事例集」第６章：KAPSEL コロイド・微粒子分散系シミュレータ，ISBN:978-4873266381（化学工業日報社, 2014） 

- Manuals (old)

-- v3.0: &ref(kapsel_3.0.pdf); (A short summary of "Install & Run" in Japanese) 

-- v2.0: &ref(kapsel2.0.pdf); (Japanese) 

-- v1.0: &ref(2006_KONA_YKN.pdf); (English), &ref(kapsel1.0.pdf); (Japanese) 

- Technical documentation (to be uploaded soon)

-- A brief guide to KAPSEL - Part1: SPM for spherical particles

-- A brief guide to KAPSEL - Part2: SPM for rigid bodies and swimmers

-- Rheology of particle dispersions using SPM and Leeds-Edwards PBC: Spherical particles and rigid bodies.

- Online technical documentation for code developers

-- http://www-tph.cheme.kyoto-u.ac.jp/kapsel/Doxygen/html/files.html (Data structures, File list, etc...)

- Related Papers

-- Simulation method & algorithm of SPM
--- &ref(2005_PRE_NY.pdf); (SPM)
--- &ref(2008_EPJE_NKY.pdf); (SPM + electrolyte solution)
--- &ref(2008_JPSJ_INY.pdf); (SPM + thermal fluctuation)
--- http://dx.doi.org/10.1016/j.jcp.2008.11.006 (Error analysis by Luo, Maxey, & Karniadakis)
--- &ref(2011_JCP_KY.pdf); (SPM + Lees-Edwards PBC)
--- &ref(2011_PRE_JYR.pdf); (SPM + LBM)
--- &ref(2012_PRE_TY.pdf); (SPM + compressible fluid)
--- http://dx.doi.org/10.1016/j.apt.2013.03.018 (SPM + LBM + Lees-Edwards PBC by Jahanshahi Javaran, Rahnama, & Jafari)
--- &ref(2013_SM_MNY.pdf); (SPM + squirmer)
--- &ref(2013_NIC-Proceedings_YMT.pdf); (Review of SPM)

-- Colloids in liquid crystal
--- &ref(2001_PRL_Y.pdf);

-- Electrophoresis of charged colloids
--- &ref(2006_PRL_KNY.pdf);
--- http://dx.doi.org/10.1016/j.jcp.2010.01.030 (Electrokinetic Flow by Luo, Beskok, & Karniadakis)
-- Sedimentation
--- &ref(2013_JPSJ_HY.pdf); (spherical particles)
--- &ref(2013_PRE_HY.pdf); (spherical particles)

-- Thermal diffusion and coagulation
--- &ref(2009_PRE_IY.pdf); (Brownian motion in shear flow)
--- &ref(2009_PTPS_INY.pdf); (velocity auto correlation)
--- &ref(2012_PRE_MFHY.pdf); (Brownian rapid coagulation)

-- Rheology of colloidal dispersions
--- &ref(2009-12_PRE_IY.pdf); (steady shear)
--- &ref(2010_EPJE_IKY.pdf); (oscillatory shear)

-- Dynamics of flexible chains and rigid bodies
--- &ref(2010_PRE_KY.pdf); (tumbling motion)
--- &ref(2011_PRE_KY.pdf); (rheology of dilute chain dispersion)

-- Dynamics of self-propelled particles (swimmers) 
--- &ref(2013_SM_MNY.pdf); (diffusive motion of squirmers)

-- Dynamics of colloids in compressible fluids
--- &ref(2013_POF_TY.pdf); (acoustic vs. viscous momentum transport between a pair of particles)
--- &ref(2013_JCP_TY.pdf); (acoustic vs. viscous momentum transport between a particle and confinement)


** Documents about OCTA [#m0b257bd]

- GOURMET (integrated GUI: UDF editor, 3D viewer, gnuplot, python, ...)

-- English 
--- &ref(gourmetoperation_eng.pdf);
--- &ref(gourmetprimer_eng.pdf);
-- Japanese
--- &ref(GourmetOperation_jpn.pdf);
--- &ref(GourmetPrimer_jpn.pdf);

- UDF (User Definable Format)

-- English 
--- &ref(udf_spec_eng.pdf);
-- Japanese
--- &ref(UDF_Spec_jpn.pdf);

- Python (UDF data can be most easily accessed using Python script)

-- English 
--- &ref(pythoninterface_eng.pdf);
-- Japanese
--- &ref(PythonInterface_jpn.pdf);


- libplatform (I/O interface library to access UDF data using C++/Fortran)

-- English 
--- &ref(libplatform_eng.pdf);
-- Japanese
--- &ref(libplatform_jpn.pdf);