Skip to the content
Skip to the Navigation
KAPSEL User Guide
Papers related to KAPSEL
Method and Algorithm: Smoothed Profile Method developed for KAPSEL
Electrophoresis
- Kang Kim, Yasuya Nakayama, and Ryoichi Yamamoto,
Direct Numerical Simulations of Electrophoresis,
Phys. Rev. Lett. 96, 208302 (2006). [http://dx.doi.org/10.1103/PhysRevLett.96.208302]
- Chunyu Shih and Ryoichi Yamamoto,
Dynamic Electrophoresis of Charged Colloids in an Alternating Electric Field,
Phys. Rev. E 89, 062317 (2014). [http://dx.doi.org/10.1103/PhysRevE.89.062317]
- Chunyu Shih, John J. Molina, and Ryoichi Yamamoto,
Dynamic polarization of a charged colloid in an oscillating electric field,
Molec. Phys. 113, 2511-2522 (2015). [http://dx.doi.org/10.1080/00268976.2015.1059510]
- Chunyu Shih, John J. Molina, and Ryoichi Yamamoto,
Field-induced dipolar attraction between like-charged colloids,
Soft Matter 12, 914-924 (2018). [http://dx.doi.org/10.1039/C8SM00395E]
Sedimentation
- Adnan Hamid, John J. Molina, and Ryoichi Yamamoto,
Direct Numerical Simulations of Sedimenting Spherical Particles at Finite Reynolds Number,
RSC Advances 4, 53681-53693 (2014). [http://dx.doi.org/10.1039/C4RA11025K]
- Adnan Hamid, John J. Molina, and Ryoichi Yamamoto,
Sedimentation of non-Brownian spheres at high volume fraction,
Soft Matter 9, 10056-10068 (2013). [http://dx.doi.org/10.1039/c3sm50748c]
- Adnan Hamid and Ryoichi Yamamoto,
Direct numerical simulations of anisotropic diffusion of spherical particles in sedimentation,
Phys. Rev. E 87, 022310 (2013). [http://dx.doi.org/10.1103/PhysRevE.87.022310]
- John J. Molina and Ryoichi Yamamoto,
Direct numerical simulations of rigid body dispersions. I. Mobility/Friction tensors of assemblies of spheres,
J. Chem. Phys. 139, 234105 (2013). [http://dx.doi.org/10.1063/1.4844115]
Rheology
- John J. Molina, Kotaro Otomura, Hayato Shiba, Hideki Kobayashi, Masaki Sano, and Ryoichi Yamamoto,
Rheological evaluation of colloidal dispersions using the smooth profile method: formulation and applications,
J. Fluid Mech. 792, 590-619 (2016). [http://dx.doi.org/10.1017/jfm.2016.78]
- Hideki Kobayashi and Ryoichi Yamamoto,
Implementation of Lees-Edwards periodic boundary conditions for direct numerical simulations of particle dispersions under shear flow,
J. Chem. Phys. 134, 064110 (2011). [http://dx.doi.org/10.1063/1.3537974]
- Takuya Iwashita and Ryoichi Yamamoto,
Direct numerical simulations for non-Newtonian rheology of concentrated particle dispersions,
Phys. Rev. E 80, 061402 (2009). [http://dx.doi.org/10.1103/PhysRevE.80.061402]
Polymer
Micro-swimmers
- Norihiro Oyama, John J. Molina, and Ryoichi Yamamoto,
Do hydrodynamically assisted binary collisions lead to orientational ordering of microswimmers?
Eur. Phys. J. E 40, 95 (2017). [http://dx.doi.org/10.1140/epje/i2017-11586-4]
- Norihiro Oyama, John J. Molina, Ryoichi Yamamoto,
Purely hydrodynamic origin for swarming of swimming particles,
Phys. Rev. E 93, 043114 (2016). [http://dx.doi.org/10.1103/PhysRevE.93.043114]
- John J. Molina and Ryoichi Yamamoto,
Diffusion of colloidal particles in swimming suspensions,
Molec. Phys. 112, 1389-1397 (2014). [http://dx.doi.org/10.1080/00268976.2014.903004]
- John J. Molina, Yasuya Nakayama, and Ryoichi Yamamoto,
Hydrodynamic interactions of self-propelled swimmers,
Soft Matter 9, 4923-4936 (2013). [http://dx.doi.org/10.1039/c3sm00140g]