KAPSEL-2 HP
InstallB
Start:
* Installation of KAPSEL binary [#h03d9749]
Here we assume that OCTA(GOURMET)-2007 is used, but the l...
** STEP 1: Download "KAPSEL" binary [#ja8071fa]
- You can download the same files from here.
-- &ref(kapsel2.1_linux64.zip); (Linux on x86-64 machine)
-- &ref(kapsel2.1_win32.zip); (32-bit Windows)
//- Visit [[KAPSEL-BBS:http://www-tph.cheme.kyoto-u.ac.jp...
//- Follow "DOWNLOAD" -> "KAPSEL-2" -> "KAPSEL-2.10" to d...
//-- "kapsel2.1_linux64.zip" (Linux on x86-64 machine)
//-- "kapsel2.1_win32.zip" (32-bit Windows)
** STEP 2: Run KAPSEL [#l8a9ee25]
- KAPSEL is a command line program which can be started a...
- Start test run using a sample input UDF "colloid_1.udf"...
- for Linux
> unzip kapsel2.1_linux64.zip
> ./kapsel -Icolloid_1.udf -Ooutput.udf -Ddefine_2.10...
- for Windows
-- unzip "kapsel2.1_win32.zip"
-- open command prompt
> kapsel -Icolloid_1.udf -Ooutput.udf -Ddefine_2.10.u...
- If you see the output as shown below, KAPSEL has been s...
#using colloid_1.udf as input
#using output.udf as output
#using define_2.10.udf as definition
#using restart.udf as restart
#
# Electrolyte eq. selected.
#
...
- If the program does not properly run or abnormally term...
** STEP 3: Download and install GOURMET [#hdf41283]
- GOURMET is a graphic platform developed by OCTA project...
- Visit [[OCTA-BBS:http://octa001.muse.aist.go.jp/phpBB3/...
- For Linux
-- Follow "DOWNLOAD" -> "OCTA2007" -> "GOURMET 4.1.0 (on ...
-- download "gourmet_2007_linux.tar.gz"
> tar zxvf gourmet_2007_linux.tar.gz
> su
> mkdir /usr/local/OCTA2007
> mv GOURMET_2007 /usr/local/OCTA2007/.
> setenv PF_FILES /usr/local/OCTA2007/GOURMET_2007
> sh /usr/local/OCTA2007/GOURMET_2007/bin/gourmet.sh
-- Linux version of GOURMET may not work properly on 64-b...
java.lang.UnsatisfiedLinkError:
/usr/local/OCTA2007/GOURMET_2007/lib/linux/libshaker...
wrong ELF class: ELFCLASS32
:: If this happens, do the following, where $version$ is ...
--- Install 32bit JVM (not RPM) in (for example) /usr/loc...
--- Edit goumet.sh file and change the command "java" to ...
- For Windows
-- Follow "DOWNLOAD" -> "OCTA2007" -> "Platform GOURMET20...
-- download "GOURMET2007.exe" and click it.
-- "Start Menu" > "All Programs" > "OCTA2007" > "Star...
- See manuals for more detailed information on GOURMET
-- English: &ref(GourmetOperation_eng.pdf); &ref(gourmetp...
-- Japanese: &ref(GourmetOperation_jpn.pdf); &ref(Gourmet...
** STEP 4: Visualize the result [#de6c8fcf]
- The above test run takes about an hour. Save &ref(outpu...
- Animation on GOURMET
-- Save &ref(particleshow.py); and &ref(show_field.py);.
-- Start GOURMET
-- "File" -> "Open" -> Open "output.udf".
-- Move down to "Python" panel, and click "Load"
-- Open "particleshow.py" (particle only) or "show_field....
-- Click "Run"
-- A new window will open, and click the playback button ...
#ref(000.jpg,,80%)
- Gnuplot on GOURMET
-- Save &ref(plot.py);.
-- Start GOURMET
-- "File" -> "Open" -> Open "output.udf".
-- Move down to "Python" panel, and click "Load"
-- Open "plot.py", and click "Run"
-- Move up "View" box, and check "Table"
-- Move down-left and select "Graph Sheet[]".
-- Move down to "Plot" panel, and type "plot "plot.dat" u...
-- Click "Plot", and you will see the time evoluation of ...
#ref(velocity_x.jpg,,40%)
- Animation on AVS/Express (optional)
-- One can enjoy much advanced data-visualization with AV...
#youtube(Zuj8T6PunC8)
End:
* Installation of KAPSEL binary [#h03d9749]
Here we assume that OCTA(GOURMET)-2007 is used, but the l...
** STEP 1: Download "KAPSEL" binary [#ja8071fa]
- You can download the same files from here.
-- &ref(kapsel2.1_linux64.zip); (Linux on x86-64 machine)
-- &ref(kapsel2.1_win32.zip); (32-bit Windows)
//- Visit [[KAPSEL-BBS:http://www-tph.cheme.kyoto-u.ac.jp...
//- Follow "DOWNLOAD" -> "KAPSEL-2" -> "KAPSEL-2.10" to d...
//-- "kapsel2.1_linux64.zip" (Linux on x86-64 machine)
//-- "kapsel2.1_win32.zip" (32-bit Windows)
** STEP 2: Run KAPSEL [#l8a9ee25]
- KAPSEL is a command line program which can be started a...
- Start test run using a sample input UDF "colloid_1.udf"...
- for Linux
> unzip kapsel2.1_linux64.zip
> ./kapsel -Icolloid_1.udf -Ooutput.udf -Ddefine_2.10...
- for Windows
-- unzip "kapsel2.1_win32.zip"
-- open command prompt
> kapsel -Icolloid_1.udf -Ooutput.udf -Ddefine_2.10.u...
- If you see the output as shown below, KAPSEL has been s...
#using colloid_1.udf as input
#using output.udf as output
#using define_2.10.udf as definition
#using restart.udf as restart
#
# Electrolyte eq. selected.
#
...
- If the program does not properly run or abnormally term...
** STEP 3: Download and install GOURMET [#hdf41283]
- GOURMET is a graphic platform developed by OCTA project...
- Visit [[OCTA-BBS:http://octa001.muse.aist.go.jp/phpBB3/...
- For Linux
-- Follow "DOWNLOAD" -> "OCTA2007" -> "GOURMET 4.1.0 (on ...
-- download "gourmet_2007_linux.tar.gz"
> tar zxvf gourmet_2007_linux.tar.gz
> su
> mkdir /usr/local/OCTA2007
> mv GOURMET_2007 /usr/local/OCTA2007/.
> setenv PF_FILES /usr/local/OCTA2007/GOURMET_2007
> sh /usr/local/OCTA2007/GOURMET_2007/bin/gourmet.sh
-- Linux version of GOURMET may not work properly on 64-b...
java.lang.UnsatisfiedLinkError:
/usr/local/OCTA2007/GOURMET_2007/lib/linux/libshaker...
wrong ELF class: ELFCLASS32
:: If this happens, do the following, where $version$ is ...
--- Install 32bit JVM (not RPM) in (for example) /usr/loc...
--- Edit goumet.sh file and change the command "java" to ...
- For Windows
-- Follow "DOWNLOAD" -> "OCTA2007" -> "Platform GOURMET20...
-- download "GOURMET2007.exe" and click it.
-- "Start Menu" > "All Programs" > "OCTA2007" > "Star...
- See manuals for more detailed information on GOURMET
-- English: &ref(GourmetOperation_eng.pdf); &ref(gourmetp...
-- Japanese: &ref(GourmetOperation_jpn.pdf); &ref(Gourmet...
** STEP 4: Visualize the result [#de6c8fcf]
- The above test run takes about an hour. Save &ref(outpu...
- Animation on GOURMET
-- Save &ref(particleshow.py); and &ref(show_field.py);.
-- Start GOURMET
-- "File" -> "Open" -> Open "output.udf".
-- Move down to "Python" panel, and click "Load"
-- Open "particleshow.py" (particle only) or "show_field....
-- Click "Run"
-- A new window will open, and click the playback button ...
#ref(000.jpg,,80%)
- Gnuplot on GOURMET
-- Save &ref(plot.py);.
-- Start GOURMET
-- "File" -> "Open" -> Open "output.udf".
-- Move down to "Python" panel, and click "Load"
-- Open "plot.py", and click "Run"
-- Move up "View" box, and check "Table"
-- Move down-left and select "Graph Sheet[]".
-- Move down to "Plot" panel, and type "plot "plot.dat" u...
-- Click "Plot", and you will see the time evoluation of ...
#ref(velocity_x.jpg,,40%)
- Animation on AVS/Express (optional)
-- One can enjoy much advanced data-visualization with AV...
#youtube(Zuj8T6PunC8)
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